Nucleotide economy
Construction, interconversion, salvage and breakdown of purine and pyrimidine nucleotides.
Purine and pyrimidine nucleotides are built by different architectural strategies. Purine atoms are assembled stepwise on a ribose-phosphate scaffold, whereas a pyrimidine ring is largely constructed before attachment to ribose phosphate.
Salvage pathways recover bases and nucleosides at lower synthetic cost, while catabolic pathways dephosphorylate, deaminate, cleave and oxidize them. The balance among synthesis, salvage and degradation depends on cell context and substrate availability.
Nucleoside diphosphate kinases and related phosphate-transfer reactions connect nucleotide pools. The map keeps individual base identities visible rather than treating ATP as a generic synonym for every nucleoside triphosphate.
Ideas to carry into the map
- De novo synthesis and salvage solve different supply problems.
- Purine and pyrimidine rings follow different construction logic.
- Nucleotide pools are continually interconverted.
Pathways in this field note
De novo purine and pyrimidine pathways that build bases on or attach them to ribose-phosphate scaffolds.
Recovery of bases and nucleosides into reusable nucleotide pools.
Dephosphorylation, deamination, cleavage and oxidation routes for purines and pyrimidines.
Phosphate-transfer reactions that balance nucleoside diphosphate and triphosphate pools.
Source-linked purine breakdown.
Source-linked pyrimidine breakdown.
Source-linked pyrimidine recovery.